Contribution to academic training

Contributions of MTH-Toulouse platform to academic training

MTH-Toulouse

Paul Sabatier Toulouse III University

Master training in metabolomics and fluxomics: Lectures and tutorials in the Master programme Structural and Functional Biochemistry (M2, 40h).
Master training in the concept of technological platforms: Lectures and tutorials and practical work in the Master degree in Plant Biology (M2, 24h).
Master training in structural analysis and metabolomics: Lectures, tutorials and practical work in the Biotechnology Master programme (M1, 60h).
Master training in metabolomics, lipidomics and fluxomics: Lectures and tutorials and practical work in the Master degree in Bioengineering (M2, 24h).

National Institute of Applied Sciences of Toulouse

Fluxomics Engineering School: Training on the whole 13C fluxomics workflow. This course is designed for PhD students, postdocs, engineers and researchers wishing to get involved in fluxomics approaches. The course consists of lectures, tutorials and practical work (32h).
School of Engineering training in metabolomics: Theoretical and experimental knowledge about metabolomics. The teaching is in the form of lectures and is aimed at engineering students (8h).

Paris Descartes University

Master level training in environmental toxicology and trace analysis: Lectures within the framework of the Master degree in Toxicology (M2, 8h).

University of Lyon

Master training in the use of isotopes in the analysis of metabolism: Lectures within the framework of the Master degree in Plant Biology (3h).

Paris-Est Créteil Val de Marne University

Master training in the basics of lipidomics: Lectures as part of the OMIC Master's course (3h).

All audiences

MSDial / MSCleanR / MSFinder processing training: From raw data from mass spectrometry to the annotated peak list (duration adapted to the level of the participants).
Training in quantitative metabolomics by mass spectrometry: Fundamental and practical knowledge to quantify metabolites by mass spectrometry. Lectures and tutorials (24h).
Training on the basics of lipidomics: From extractions to analyses by LC-MS and GC-MS to identify and quantify lipids and fatty acids. Lectures and practical work (24h).

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Contributions of the MTH-Bordeaux Platform to academic training

MTH-Bordeaux

University of Bordeaux

Licence course in Rhizosphere Metabolomics: Metabolomics for the study of rhizochemicals (tutorials of 2h30, L3).
International Master module in Metabolomics: Lectures and practicals on metabolomics (NMR, MS, imaging) and chemometrics (data processing, multivariate stats)(6h lectures, 12h practicals).
Doctoral training in Metabolomics: Workshop on general aspects of metabolomics, lipidomics, flow modelling, and chemometrics (1 day, PhD students).
CliMetabolomics Summer School: Franco-German workshop on wine authenticity (NMR, MS), multivariate statistics (2 days for 12 junior scientists) for PhDs and Post-docs.

National Museum of Natural History (Paris)

Doctoral training in Metabolomics: Processing a 1D 1H NMR series using an interactive tool - Principles and practical aspects (1 day, PhD students).

All audiences

BioStatFlow / MetaboAnalyst training: Uni- and multivariate analyses with BioStatFlow or MetaboAnalyst (duration adapted to the participants' level).
MSDial training: Bioinformatics analyses for LC-MS data processing (duration adapted to the participants' level).
NMRProcFlow training: Visualisation and processing of 1D NMR spectra with NMRProcFlow (duration adapted to the participants' level).
Chemometrics training: Uni- and multivariate analyses applied to metabolomic data (duration adapted to the participants' level).

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Contributions of the MTH-Clermont platform to academic training

MTH-Clermont

University of Clermont Auvergne

Level 3 training in liquid-gas chromatography: Lectures and tutorials in Environmental Chemistry (11h).
Level 3 training in NMR spectroscopy: Improvement in 1D and 2D NMR. Lectures, tutorials and practical work in Environmental Chemistry (20h).
Master training in proteome and metabolome analysis: Lectures, tutorials and practical work in Master 1 Microbiology, Bioinformatics and Health Biology (30h).
Master training in fluxomics: Introduction to fluxomics in the form of lectures and tutorials in Master 2 Microbiology (3h).
Master training in integrated omics analysis: Lectures, tutorials and practical work in Master 2 Bioinformatics (14h).
Doctoral training in structural analysis and metabolomics: Lectures, tutorials and practical work at the Graduate School of Basic Sciences (7h).

Polytech' Clermont

Engineering school training in NMR and metabolomics applied to bioengineering: Lectures and tutorials (10h).

Jean Monet St Etienne University

Training in mass spectrometry: Lectures in DUT Mesures Physiques (2h).

Paris Diderot University

Specialised university training on methods and tools for metabolomics: Lectures and practical work as part of the University Diploma in Integrative Bioinformatics (DUBII) (1 day).

All audiences

Specialised training in metabolomics data processing: Data extraction and annotation of mass spectrometry data (duration adapted to the participants' level).

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Contributions of the MTH-Grand-Ouest platform to academic training

MTH-Grand-Ouest

University of Nantes

Training in Master of Analytical Chemistry: Teaching of analytical chemistry (NMR, MS, Chromatography, Chemometrics...) Lectures, tutorials and practical work in Master A3M in alternation and initial training (NMR: 61h M1+M2, Chromatography: 64h M1+M2, MS: 76h M1+M2).
Master training in metabolomics: Introduction to metabolomics; Lectures, tutorials and practical work in Master A3M (sandwich course and initial training, with 21h in M2).

University of Rennes 1

Master training in metabolomics: Introduction to metabolomics in a Biotechnology and Molecular Biology course. Lectures in the Master's degree in Biology, Agrosciences, Plant Improvement, Production and Development (6h).
Master training in metabolomics: Intervention in 3 teaching units (EU Extractive and Analytical Tools and Methods; 40h; EU Phytochemistry and Chemistry of Natural Substances; 50h; EU Experimental Project; 35h) of the Master in Biology, Agrosciences, Plant Improvement, Production and Valorisation, 2nd year, Option Phytochemistry, Quality and Use Value. The teaching is done in the form of lectures, tutorials and practical work with the use of the MOOC UseMetabo developed by the French metabolomics and fluxomics community.

ONIRIS (Nantes)

Doctoral Training in Metabolomics: Introduction to Metabolomics for PhD students with lectures and tutorials (16h) The first part is aimed at PhD students and engineers. The second part is aimed at PhD students and engineers who have worked on metabolomic studies.

All audiences

Metabolomics data processing training: Presentation and first use of the Workflow4Metabolomics tools (W4M; duration adapted to the participants' level).

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Contributions of Paris-Saclay platform to academic training

MTH-Paris

Sorbonne University (Paris)

Master training in omics data analysis and integration: Lectures in the Master of Systems Immunology (3h).

Paris Diderot University

Specialised university training on methods and tools for metabolomics: Lectures and practical work as part of the University Diploma in Integrative Bioinformatics (DUBII) (1 day).